In silico Transcriptome (iTranscriptome)

Geo-seq: 3D Transcriptome of the mouse embryo at gastrulation

Querying the interested gene

Please input interested gene symbol:

Please input cutoff of p value for co-expression analysis:

Top 10 genes with the highest correlation to query gene:

To download all the related data, please click here.

Key features

- High resolution - More sensitive
- 2D & 3D visualization - Searchable web service

E65 embryo database

Pattern search by gene
Query and display the expression pattern of a query gene in either a corn plot or a 3D embryo model
Gene search by gene
Search for genes that share similar expression patterns of a query gene.
Gene search by pattern
Search for genes using a query pattern (Choose one of 5 predefined patterns or input interested pattern).
Gene activity score
Calculate the enrichment score for a query gene list based on ranked gene expression of each sample.